Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-fucose isomerase | SAMN05421757_101592 | Not Available | Positive | 610360 - 611742 | 48635.6 |
| predicted dehydrogenase | SAMN05421757_101593 | Not Available | Positive | 611747 - 612838 | 40650.6 |
| aldose 1-epimerase | SAMN05421757_101594 | Not Available | Positive | 612835 - 613845 | 36121.9 |
| succinate semialdehyde dehydrogenase | SAMN05421757_101595 | Not Available | Positive | 613842 - 615293 | 50842.7 |
| (s)-sulfolactate dehydrogenase | SAMN05421757_101596 | Not Available | Positive | 615296 - 616219 | 32145.1 |
| sulfopyruvate decarboxylase subunit alpha | SAMN05421757_101597 | Not Available | Positive | 616232 - 616738 | 18370.5 |
| sulfopyruvate decarboxylase subunit beta | SAMN05421757_101598 | Not Available | Positive | 616735 - 617289 | 19605.6 |
| anaerobic selenocysteine-containing dehydrogenase | SAMN05421757_101599 | Not Available | Positive | 617377 - 620232 | 106075.0 |
| fe-s-cluster-containing dehydrogenase component | SAMN05421757_101600 | Not Available | Positive | 620229 - 620972 | 26737.4 |
| dmso reductase anchor subunit | SAMN05421757_101601 | Not Available | Positive | 620981 - 621919 | 32837.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
