Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-aminobutyrate aminotransferase apoenzyme | SAMN05421757_101572 | Not Available | Positive | 587932 - 589290 | 47992.3 |
| putative tricarboxylic transport membrane protein | SAMN05421757_101573 | Not Available | Negative | 589352 - 590896 | 53336.8 |
| putative tricarboxylic transport membrane protein | SAMN05421757_101574 | Not Available | Negative | 590912 - 591343 | 15298.3 |
| putative tricarboxylic transport membrane protein | SAMN05421757_101575 | Not Available | Negative | 591494 - 592480 | 33962.1 |
| two-component system, ompr family, response regulator tctd | SAMN05421757_101576 | Not Available | Positive | 592693 - 593364 | 24560.7 |
| two-component system, ompr family, sensor histidine kinase tcte | SAMN05421757_101577 | Not Available | Positive | 593371 - 594729 | 48710.4 |
| iron(iii) transport system substrate-binding protein | SAMN05421757_101578 | Not Available | Positive | 594726 - 595799 | 38349.5 |
| predicted nad/fad-binding protein | SAMN05421757_101579 | Not Available | Positive | 595924 - 597270 | 49191.2 |
| cyclopropane-fatty-acyl-phospholipid synthase | SAMN05421757_101580 | Not Available | Positive | 597209 - 598366 | 42886.6 |
| hypothetical protein | SAMN05421757_101581 | Not Available | Positive | 598359 - 598853 | 18184.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
