Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit a | SAMN05421757_101521 | Not Available | Positive | 531334 - 532824 | 52426.3 |
| hypothetical protein | SAMN05421757_101522 | Not Available | Positive | 532861 - 533640 | 26275.5 |
| n-acetylmuramoyl-l-alanine amidase | SAMN05421757_101523 | Not Available | Positive | 533649 - 534398 | 26351.2 |
| uncharacterized membrane protein yebe, duf533 family | SAMN05421757_101525 | Not Available | Positive | 534865 - 535581 | 24725.8 |
| lsu ribosomal protein l33p | SAMN05421757_101526 | Not Available | Positive | 535726 - 535893 | 6338.87 |
| uncharacterized conserved protein, laba/duf88 family | SAMN05421757_101527 | Not Available | Positive | 536003 - 536707 | 25037.2 |
| hypothetical protein | SAMN05421757_101528 | Not Available | Negative | 536782 - 537543 | 27079.6 |
| uncharacterized conserved protein yjis, duf1127 family | SAMN05421757_101529 | Not Available | Negative | 537680 - 537895 | 8234.91 |
| transcriptional regulator, lysr family | SAMN05421757_101530 | Not Available | Positive | 538021 - 538923 | 32921.3 |
| nadph2:quinone reductase | SAMN05421757_101531 | Not Available | Negative | 538880 - 539839 | 33820.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
