Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative peptidoglycan binding domain-containing protein | SAMN05421757_101511 | Not Available | Negative | 524286 - 524840 | 19412.0 |
| ob-fold nucleic acid binding domain-containing protein | SAMN05421757_101512 | Not Available | Negative | 524978 - 525379 | 14578.7 |
| ferredoxin, 2fe-2s | SAMN05421757_101513 | Not Available | Positive | 525501 - 525824 | 11585.8 |
| hypothetical protein | SAMN05421757_101514 | Not Available | Positive | 525824 - 526603 | 26641.0 |
| 23s rrna pseudouridine2605 synthase | SAMN05421757_101515 | Not Available | Negative | 526749 - 527543 | 29173.5 |
| trna(arg) a34 adenosine deaminase tada | SAMN05421757_101516 | Not Available | Positive | 527606 - 528055 | 15755.8 |
| l-ascorbate metabolism protein ulag, beta-lactamase superfamily | SAMN05421757_101517 | Not Available | Negative | 528067 - 528759 | 24248.2 |
| ceramidase | SAMN05421757_101518 | Not Available | Positive | 528820 - 529470 | 23710.2 |
| predicted arabinose efflux permease, mfs family | SAMN05421757_101519 | Not Available | Negative | 529569 - 530888 | 46354.3 |
| aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit c | SAMN05421757_101520 | Not Available | Positive | 531050 - 531337 | 10446.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
