Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421757_101501 | Not Available | Negative | 509838 - 514067 | 151285.0 |
| thiamine pyrophosphokinase | SAMN05421757_101502 | Not Available | Positive | 514210 - 514887 | 23868.2 |
| l-serine ammonia-lyase | SAMN05421757_101503 | Not Available | Negative | 515036 - 516409 | 47336.7 |
| ribose-5-phosphate isomerase | SAMN05421757_101504 | Not Available | Positive | 516619 - 517407 | 28228.6 |
| nadph-glutathione reductase | SAMN05421757_101505 | Not Available | Positive | 517440 - 518798 | 48867.5 |
| protease ftsh subunit hflk | SAMN05421757_101506 | Not Available | Positive | 518886 - 520049 | 41046.1 |
| protease ftsh subunit hflc | SAMN05421757_101507 | Not Available | Positive | 520051 - 520935 | 32878.1 |
| hypothetical protein | SAMN05421757_101508 | Not Available | Positive | 520932 - 521129 | 7058.32 |
| serine protease do | SAMN05421757_101509 | Not Available | Positive | 521413 - 522903 | 52154.4 |
| hypothetical protein | SAMN05421757_101510 | Not Available | Negative | 523364 - 524050 | 24331.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
