Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tellurite resistance protein | SAMN05421757_101471 | Not Available | Positive | 480109 - 481083 | 34992.2 |
| dna-binding transcriptional regulator, lysr family | SAMN05421757_101472 | Not Available | Positive | 481148 - 482041 | 31981.8 |
| formate dehydrogenase gamma subunit | SAMN05421757_101473 | Not Available | Positive | 482125 - 482604 | 16640.0 |
| formate dehydrogenase beta subunit | SAMN05421757_101474 | Not Available | Positive | 482601 - 484133 | 53967.9 |
| formate dehydrogenase alpha subunit | SAMN05421757_101475 | Not Available | Positive | 484130 - 487018 | 104576.0 |
| fdhd protein | SAMN05421757_101476 | Not Available | Positive | 487020 - 487808 | 27293.2 |
| formate dehydrogenase delta subunit | SAMN05421757_101477 | Not Available | Positive | 487805 - 488032 | 8363.05 |
| poly(3-hydroxybutyrate) depolymerase | SAMN05421757_101478 | Not Available | Negative | 488098 - 489381 | 47507.0 |
| polyhydroxyalkanoate synthase | SAMN05421757_101479 | Not Available | Positive | 489487 - 491280 | 67067.4 |
| phasin protein | SAMN05421757_101480 | Not Available | Positive | 491411 - 491860 | 15895.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
