Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr00659 family protein | SAMN05421757_101451 | Not Available | Negative | 460434 - 461150 | 24700.7 |
| holin-like protein | SAMN05421757_101452 | Not Available | Negative | 461143 - 461502 | 12289.7 |
| lsu ribosomal protein l25p | SAMN05421757_101453 | Not Available | Negative | 461647 - 462276 | 22637.1 |
| ca2+-transporting atpase | SAMN05421757_101454 | Not Available | Negative | 462510 - 465116 | 91635.9 |
| phasin protein | SAMN05421757_101455 | Not Available | Positive | 465262 - 465612 | 13028.6 |
| hypothetical protein | SAMN05421757_101456 | Not Available | Positive | 465710 - 466543 | 29897.4 |
| glyceraldehyde-3-phosphate dehydrogenase (nad+) | SAMN05421757_101457 | Not Available | Positive | 466554 - 467555 | 35629.7 |
| ribulose-5-phosphate 3-epimerase | SAMN05421757_101458 | Not Available | Positive | 467911 - 468609 | 24678.8 |
| hypothetical protein | SAMN05421757_101459 | Not Available | Positive | 468714 - 469049 | 12170.9 |
| metallo-beta-lactamase superfamily protein | SAMN05421757_101460 | Not Available | Positive | 469158 - 470081 | 32658.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
