Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421757_1263 | Not Available | Positive | 5160558 - 5161445 | 31036.2 |
| right handed beta helix region | SAMN05421757_1271 | Not Available | Negative | 5161487 - 5162845 | 47126.8 |
| mannose-1-phosphate guanylyltransferase/mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase | SAMN05421757_1272 | Not Available | Negative | 5162838 - 5164259 | 51123.6 |
| hypothetical protein | SAMN05421757_1273 | Not Available | Negative | 5164335 - 5164633 | 9799.82 |
| copper-binding protein (nosd) | SAMN05421757_1281 | Not Available | Negative | 5164675 - 5166048 | 47393.7 |
| mannose-1-phosphate guanylyltransferase/mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase | SAMN05421757_1282 | Not Available | Negative | 5166041 - 5167462 | 51005.2 |
| hypothetical protein | SAMN05421757_1283 | Not Available | Negative | 5167513 - 5167811 | 10256.2 |
| hypothetical protein | SAMN05421757_1291 | Not Available | Positive | 5167812 - 5167905 | 3081.71 |
| dna replication protein dnac | SAMN05421757_1292 | Not Available | Negative | 5167957 - 5168712 | 28400.8 |
| transposase | SAMN05421757_1293 | Not Available | Negative | 5168709 - 5170181 | 55712.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
