Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421757_1251 | Not Available | Negative | 5152395 - 5152508 | 4293.67 |
| hypothetical protein | SAMN05421757_1252 | Not Available | Negative | 5152505 - 5152879 | 13521.4 |
| hypothetical protein | SAMN05421757_1253 | Not Available | Negative | 5152866 - 5153306 | 15511.5 |
| hypothetical protein | SAMN05421757_1254 | Not Available | Positive | 5153800 - 5155014 | 44794.8 |
| hypothetical protein | SAMN05421757_1255 | Not Available | Positive | 5155131 - 5155223 | 3120.73 |
| acetyltransferase (gnat) family protein | SAMN05421757_1256 | Not Available | Negative | 5155411 - 5156214 | 29224.7 |
| hypothetical protein | SAMN05421757_1257 | Not Available | Negative | 5156553 - 5156813 | 9245.09 |
| conserved hypothetical protein | SAMN05421757_1258 | Not Available | Negative | 5156868 - 5157200 | 12215.6 |
| gdp-mannose 6-dehydrogenase | SAMN05421757_1261 | Not Available | Positive | 5157724 - 5159043 | 46235.5 |
| glycosyltransferase alg8 | SAMN05421757_1262 | Not Available | Positive | 5159061 - 5160530 | 54069.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
