Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421757_1223 | Not Available | Negative | 5131217 - 5131999 | 28392.1 |
| hypothetical protein | SAMN05421757_1224 | Not Available | Negative | 5132194 - 5132655 | 17590.0 |
| hypothetical protein | SAMN05421757_1225 | Not Available | Negative | 5132664 - 5133050 | 13405.8 |
| hypothetical protein | SAMN05421757_1226 | Not Available | Negative | 5133047 - 5133361 | 11418.3 |
| hypothetical protein | SAMN05421757_1227 | Not Available | Positive | 5134149 - 5134469 | 12041.3 |
| hypothetical protein | SAMN05421757_1228 | Not Available | Positive | 5134684 - 5134872 | 6688.8 |
| hypothetical protein | SAMN05421757_1229 | Not Available | Positive | 5135133 - 5135390 | 8974.82 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN05421757_12210 | Not Available | Negative | 5135486 - 5136220 | 27101.5 |
| hypothetical protein | SAMN05421757_12211 | Not Available | Positive | 5136371 - 5136607 | 8227.94 |
| chaperonin groes | SAMN05421757_12212 | Not Available | Positive | 5136741 - 5137028 | 10363.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
