Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421757_12110 | Not Available | Negative | 5123839 - 5124648 | 29247.4 |
| hypothetical protein | SAMN05421757_12111 | Not Available | Negative | 5124645 - 5125031 | 13599.3 |
| cold-shock dna-binding protein family | SAMN05421757_12112 | Not Available | Positive | 5125913 - 5126119 | 7158.37 |
| omega-6 fatty acid desaturase (delta-12 desaturase) | SAMN05421757_12113 | Not Available | Positive | 5126313 - 5127212 | 33738.1 |
| hypothetical protein | SAMN05421757_12114 | Not Available | Positive | 5127261 - 5127938 | 24292.8 |
| putative transposase | SAMN05421757_12115 | Not Available | Positive | 5128163 - 5128255 | 3371.1 |
| transposase, mutator family | SAMN05421757_12116 | Not Available | Positive | 5128630 - 5129286 | 24352.6 |
| transposase, mutator family | SAMN05421757_12117 | Not Available | Positive | 5129308 - 5129646 | 12692.2 |
| hypothetical protein | SAMN05421757_1221 | Not Available | Negative | 5130109 - 5130246 | 4685.54 |
| transglutaminase-like enzyme, putative cysteine protease | SAMN05421757_1222 | Not Available | Negative | 5130379 - 5131185 | 30275.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
