Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421757_12021 | Not Available | Positive | 5116333 - 5116532 | 7390.53 |
| hypothetical protein | SAMN05421757_1211 | Not Available | Negative | 5116562 - 5116825 | 9537.1 |
| transglutaminase-like enzyme, putative cysteine protease | SAMN05421757_1212 | Not Available | Positive | 5117209 - 5118099 | 32956.2 |
| parb-like nuclease domain-containing protein | SAMN05421757_1213 | Not Available | Positive | 5118171 - 5118419 | 9398.78 |
| hypothetical protein | SAMN05421757_1214 | Not Available | Positive | 5118559 - 5118786 | 8143.83 |
| cold-shock dna-binding protein family | SAMN05421757_1215 | Not Available | Positive | 5118953 - 5119159 | 7275.44 |
| transposase | SAMN05421757_1216 | Not Available | Negative | 5119981 - 5121537 | 58155.6 |
| hypothetical protein | SAMN05421757_1217 | Not Available | Negative | 5121777 - 5121872 | 3537.18 |
| hypothetical protein | SAMN05421757_1218 | Not Available | Negative | 5122253 - 5122744 | 17958.4 |
| transglutaminase-like enzyme, putative cysteine protease | SAMN05421757_1219 | Not Available | Negative | 5122962 - 5123741 | 28992.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
