Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted oxidoreductase | SAMN05421757_101441 | Not Available | Positive | 452339 - 453349 | 35277.9 |
| ssu ribosomal protein s1p | SAMN05421757_101442 | Not Available | Positive | 453619 - 455298 | 61274.7 |
| integration host factor subunit beta | SAMN05421757_101443 | Not Available | Positive | 455641 - 455928 | 10895.1 |
| protein of unknown function | SAMN05421757_101444 | Not Available | Positive | 455944 - 456309 | 13417.7 |
| phosphoribosylanthranilate isomerase | SAMN05421757_101445 | Not Available | Positive | 456317 - 456961 | 22419.1 |
| ribosomal protein s18 acetylase rimi | SAMN05421757_101446 | Not Available | Positive | 456958 - 457407 | 16107.2 |
| tryptophan synthase, beta chain | SAMN05421757_101447 | Not Available | Positive | 457573 - 458805 | 44944.1 |
| hypothetical protein | SAMN05421757_101448 | Not Available | Negative | 458854 - 459237 | 13957.5 |
| peptidyl-trna hydrolase | SAMN05421757_101449 | Not Available | Negative | 459331 - 460014 | 24582.2 |
| heme-degrading monooxygenase hmoa | SAMN05421757_101450 | Not Available | Positive | 460117 - 460437 | 12178.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
