Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421757_1201 | Not Available | Positive | 5096843 - 5096993 | 5356.25 |
| hypothetical protein | SAMN05421757_1202 | Not Available | Negative | 5097155 - 5097571 | 14688.9 |
| hypothetical protein | SAMN05421757_1203 | Not Available | Positive | 5097908 - 5098222 | 11829.2 |
| hypothetical protein | SAMN05421757_1204 | Not Available | Positive | 5098219 - 5098572 | 12269.7 |
| hypothetical protein | SAMN05421757_1205 | Not Available | Positive | 5098652 - 5099413 | 27836.3 |
| uncharacterized conserved protein, nad-dependent epimerase/dehydratase family | SAMN05421757_1206 | Not Available | Positive | 5099502 - 5100701 | 43099.8 |
| predicted amino acid racemase | SAMN05421757_1207 | Not Available | Positive | 5100698 - 5101819 | 39592.3 |
| hypothetical protein | SAMN05421757_1208 | Not Available | Positive | 5102203 - 5102775 | 21168.9 |
| hypothetical protein | SAMN05421757_1209 | Not Available | Positive | 5102765 - 5103076 | 11961.0 |
| gtpase, g3e family | SAMN05421757_12010 | Not Available | Negative | 5104118 - 5105107 | 36215.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
