Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfotransferase family protein | SAMN05421757_11728 | Not Available | Positive | 5051369 - 5052751 | 52070.1 |
| hypothetical protein | SAMN05421757_11729 | Not Available | Positive | 5052755 - 5052943 | 7171.48 |
| hypothetical protein | SAMN05421757_1181 | Not Available | Negative | 5053752 - 5054066 | 9862.01 |
| hypothetical protein | SAMN05421757_1182 | Not Available | Negative | 5054082 - 5054267 | 6883.81 |
| hypothetical protein | SAMN05421757_1183 | Not Available | Negative | 5054295 - 5054435 | 5182.52 |
| hypothetical protein | SAMN05421757_1184 | Not Available | Negative | 5054577 - 5054885 | 10266.1 |
| uncharacterized membrane protein yeaq/ymge, transglycosylase-associated protein family | SAMN05421757_1185 | Not Available | Negative | 5054962 - 5055315 | 11688.1 |
| hypothetical protein | SAMN05421757_1186 | Not Available | Negative | 5055428 - 5055775 | 11225.2 |
| sh3 domain-containing protein | SAMN05421757_1187 | Not Available | Negative | 5055832 - 5056806 | 33578.4 |
| alpha/beta hydrolase fold | SAMN05421757_1188 | Not Available | Negative | 5056864 - 5058588 | 61897.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
