Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421757_101430 | Not Available | Negative | 442251 - 442580 | 11801.2 |
| phosphate starvation-inducible protein phoh | SAMN05421757_101431 | Not Available | Positive | 442957 - 443973 | 36930.7 |
| probable rrna maturation factor | SAMN05421757_101432 | Not Available | Positive | 443987 - 444487 | 17897.1 |
| magnesium and cobalt transporter | SAMN05421757_101433 | Not Available | Positive | 444526 - 445455 | 33641.5 |
| apolipoprotein n-acyltransferase | SAMN05421757_101434 | Not Available | Positive | 445462 - 446994 | 54372.7 |
| methionine adenosyltransferase | SAMN05421757_101436 | Not Available | Positive | 447079 - 448248 | 42254.8 |
| trna (guanine-n(7)-)-methyltransferase | SAMN05421757_101437 | Not Available | Positive | 448522 - 449235 | 27106.2 |
| 2,5-diketo-d-gluconate reductase a | SAMN05421757_101438 | Not Available | Negative | 449252 - 450082 | 30140.0 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | SAMN05421757_101439 | Not Available | Positive | 450231 - 451583 | 46718.1 |
| cytidylate kinase | SAMN05421757_101440 | Not Available | Positive | 451668 - 452303 | 21982.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
