Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421757_11533 | Not Available | Negative | 4970297 - 4970473 | 6379.56 |
| ribonuclease, rne/rng family | SAMN05421757_11534 | Not Available | Negative | 4970470 - 4971513 | 37259.9 |
| septum formation protein | SAMN05421757_11535 | Not Available | Negative | 4971510 - 4972088 | 20650.9 |
| bacterial translation initiation factor 1 (bif-1) | SAMN05421757_11536 | Not Available | Negative | 4972098 - 4972316 | 8358.29 |
| predicted amidohydrolase | SAMN05421757_11537 | Not Available | Negative | 4972393 - 4973292 | 31589.7 |
| hypothetical protein | SAMN05421757_11538 | Not Available | Negative | 4973289 - 4973876 | 21938.1 |
| protein tyrosine phosphatase | SAMN05421757_11539 | Not Available | Negative | 4973873 - 4974337 | 17427.6 |
| uncharacterized protein, upf0262 family | SAMN05421757_11540 | Not Available | Negative | 4974341 - 4974826 | 18154.8 |
| histidinol dehydrogenase | SAMN05421757_11541 | Not Available | Negative | 4974823 - 4976133 | 46374.0 |
| protein of unknown function | SAMN05421757_11542 | Not Available | Negative | 4976201 - 4976677 | 17277.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
