Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lsu ribosomal protein l11p | SAMN05421757_11445 | Not Available | Negative | 4929091 - 4929519 | 14986.4 |
| transcription antitermination protein nusg | SAMN05421757_11446 | Not Available | Negative | 4929683 - 4930216 | 20070.9 |
| protein translocase subunit sece/sec61 gamma | SAMN05421757_11447 | Not Available | Negative | 4930434 - 4930625 | 7264.25 |
| hypothetical protein | SAMN05421757_11448 | Not Available | Positive | 4930843 - 4932132 | 46172.7 |
| Trna-trp | Not Available | Not Available | Positive | 4932511 - 4932586 | Not Available |
| hypothetical protein | SAMN05421757_11450 | Not Available | Positive | 4932802 - 4933593 | 29633.6 |
| dienelactone hydrolase | SAMN05421757_11451 | Not Available | Negative | 4933607 - 4934497 | 31704.8 |
| Trna-met | Not Available | Not Available | Positive | 4935002 - 4935078 | Not Available |
| phage integrase family protein | SAMN05421757_1151 | Not Available | Positive | 4936376 - 4936810 | 16324.6 |
| cupin domain protein | SAMN05421757_1152 | Not Available | Negative | 4937008 - 4937484 | 17028.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
