Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione s-transferase | SAMN05421757_11415 | Not Available | Positive | 4890195 - 4890830 | 23695.0 |
| acetyl-coa c-acetyltransferase | SAMN05421757_11416 | Not Available | Positive | 4890846 - 4892057 | 42676.3 |
| 3-hydroxyacyl-coa dehydrogenase / enoyl-coa hydratase / 3-hydroxybutyryl-coa epimerase | SAMN05421757_11417 | Not Available | Positive | 4892100 - 4894298 | 78355.7 |
| hint domain-containing protein | SAMN05421757_11418 | Not Available | Negative | 4894414 - 4895094 | 24181.1 |
| hypothetical protein | SAMN05421757_11419 | Not Available | Positive | 4895429 - 4896445 | 35799.3 |
| sporulation related domain-containing protein | SAMN05421757_11420 | Not Available | Negative | 4896568 - 4897614 | 36490.6 |
| uracil phosphoribosyltransferase | SAMN05421757_11421 | Not Available | Negative | 4897709 - 4898341 | 23114.4 |
| adenosine deaminase | SAMN05421757_11422 | Not Available | Negative | 4898334 - 4899320 | 35453.9 |
| phosphopentomutase | SAMN05421757_11423 | Not Available | Negative | 4899320 - 4900531 | 42790.4 |
| thymidine phosphorylase | SAMN05421757_11424 | Not Available | Negative | 4900528 - 4901838 | 44939.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
