Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pimeloyl-acp methyl ester carboxylesterase | SAMN05421757_101420 | Not Available | Negative | 432838 - 433674 | 30913.5 |
| 2-haloacid dehalogenase | SAMN05421757_101421 | Not Available | Negative | 433671 - 434360 | 24675.2 |
| hypothetical protein | SAMN05421757_101422 | Not Available | Positive | 434528 - 434983 | 16444.2 |
| enoyl-[acyl-carrier-protein] reductase | SAMN05421757_101423 | Not Available | Negative | 435023 - 435811 | 27665.1 |
| 3-oxoacyl-[acyl-carrier-protein] synthase i | SAMN05421757_101424 | Not Available | Negative | 435818 - 437047 | 42363.5 |
| 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase | SAMN05421757_101425 | Not Available | Negative | 437080 - 437592 | 18760.7 |
| fur family transcriptional regulator, iron response regulator | SAMN05421757_101426 | Not Available | Positive | 437772 - 438188 | 15470.1 |
| nucleobase:cation symporter-2, ncs2 family | SAMN05421757_101427 | Not Available | Positive | 438368 - 439786 | 48398.4 |
| hypothetical protein | SAMN05421757_101428 | Not Available | Negative | 439875 - 440729 | 32274.0 |
| pp_00425 | SAMN05421757_101429 | Not Available | Positive | 440877 - 442196 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
