Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein, duf952 family | SAMN05421757_1145 | Not Available | Positive | 4882645 - 4882983 | 12279.6 |
| dihydroorotate oxidase a | SAMN05421757_1146 | Not Available | Positive | 4882980 - 4884020 | 35919.5 |
| snoal-like domain-containing protein | SAMN05421757_1147 | Not Available | Positive | 4884154 - 4884483 | 12110.4 |
| multidrug resistance protein, mate family | SAMN05421757_1148 | Not Available | Negative | 4884502 - 4885833 | 47152.4 |
| acyl-coenzyme a thioesterase paai, contains hgg motif | SAMN05421757_1149 | Not Available | Negative | 4885826 - 4886335 | 18802.5 |
| uncharacterized domain 1-containing protein | SAMN05421757_11410 | Not Available | Negative | 4886332 - 4886775 | 15726.8 |
| transcriptional regulator, merr family | SAMN05421757_11411 | Not Available | Positive | 4886906 - 4887274 | 14498.4 |
| transcriptional regulator, merr family | SAMN05421757_11412 | Not Available | Positive | 4887493 - 4887891 | 15612.8 |
| hypothetical protein | SAMN05421757_11413 | Not Available | Positive | 4887925 - 4889703 | 63636.2 |
| hypothetical protein | SAMN05421757_11414 | Not Available | Positive | 4889720 - 4889932 | 8322.95 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
