Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integrase | SAMN05421757_11236 | Not Available | Positive | 4772710 - 4774056 | 50659.4 |
| methyltransferase, fkbm family | SAMN05421757_11237 | Not Available | Positive | 4776520 - 4776885 | 13563.1 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05421757_11238 | Not Available | Positive | 4776938 - 4777978 | 37632.4 |
| membrane protein involved in the export of o-antigen and teichoic acid | SAMN05421757_11239 | Not Available | Positive | 4778320 - 4779600 | 45460.3 |
| hypothetical protein | SAMN05421757_11240 | Not Available | Positive | 4779593 - 4780645 | 37441.8 |
| glycosyl transferases group 1 | SAMN05421757_11241 | Not Available | Positive | 4781475 - 4782203 | 26149.2 |
| hypothetical protein | SAMN05421757_11242 | Not Available | Positive | 4782200 - 4783585 | 50761.8 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05421757_11243 | Not Available | Positive | 4783582 - 4784721 | 41756.2 |
| hypothetical protein | SAMN05421757_11244 | Not Available | Positive | 4786117 - 4786500 | 13966.5 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05421757_11245 | Not Available | Positive | 4786532 - 4787359 | 32225.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
