Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron complex transport system atp-binding protein | SAMN05421757_1126 | Not Available | Positive | 4728787 - 4729551 | 27096.8 |
| arylsulfatase a | SAMN05421757_1127 | Not Available | Positive | 4729999 - 4733118 | 111423.0 |
| hypothetical protein | SAMN05421757_1128 | Not Available | Negative | 4733316 - 4734080 | 27556.6 |
| hypothetical protein | SAMN05421757_1129 | Not Available | Negative | 4734283 - 4734570 | 10899.9 |
| transcriptional regulator | SAMN05421757_11210 | Not Available | Negative | 4735048 - 4735992 | 33963.1 |
| glycerol kinase | SAMN05421757_11211 | Not Available | Negative | 4736084 - 4737556 | 51485.2 |
| transketolase subunit b | SAMN05421757_11212 | Not Available | Negative | 4737566 - 4738525 | 33064.6 |
| transketolase subunit a | SAMN05421757_11213 | Not Available | Negative | 4738522 - 4739352 | 29800.5 |
| monosaccharide abc transporter membrane protein, cut2 family | SAMN05421757_11214 | Not Available | Positive | 4739576 - 4740556 | 33479.3 |
| monosaccharide abc transporter substrate-binding protein, cut2 family | SAMN05421757_11215 | Not Available | Positive | 4740659 - 4741600 | 32602.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
