Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421757_111146 | Not Available | Negative | 4689369 - 4689869 | 19040.4 |
| hypothetical protein | SAMN05421757_111147 | Not Available | Negative | 4690192 - 4690440 | 9421.16 |
| prolipoprotein diacylglyceryl transferase | SAMN05421757_111148 | Not Available | Positive | 4690538 - 4691464 | 33708.9 |
| sam-dependent methyltransferase, mida family | SAMN05421757_111149 | Not Available | Positive | 4691461 - 4692534 | 38227.7 |
| conserved hypothetical protein | SAMN05421757_111150 | Not Available | Positive | 4692531 - 4693283 | 27287.3 |
| hypothetical protein | SAMN05421757_111151 | Not Available | Positive | 4693429 - 4693578 | 5568.66 |
| hint domain-containing protein | SAMN05421757_111152 | Not Available | Positive | 4693836 - 4694639 | 28991.6 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN05421757_111153 | Not Available | Negative | 4694646 - 4695377 | 26206.4 |
| exodeoxyribonuclease-5 | SAMN05421757_111154 | Not Available | Negative | 4695374 - 4696903 | 55686.6 |
| acyl homoserine lactone synthase | SAMN05421757_111155 | Not Available | Negative | 4696978 - 4697622 | 24619.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
