Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| snoal-like domain-containing protein | SAMN05421757_101400 | Not Available | Negative | 420435 - 420767 | 12047.4 |
| hypothetical protein | SAMN05421757_101401 | Not Available | Positive | 421156 - 422157 | 37040.6 |
| cbs domain-containing protein | SAMN05421757_101402 | Not Available | Negative | 422339 - 422767 | 15819.5 |
| uncharacterized protein, contains gyd domain | SAMN05421757_101403 | Not Available | Positive | 423007 - 423336 | 11168.4 |
| tetratricopeptide repeat-containing protein | SAMN05421757_101404 | Not Available | Positive | 423445 - 423990 | 19332.4 |
| hypothetical protein | SAMN05421757_101405 | Not Available | Positive | 424089 - 424346 | 8440.84 |
| hypothetical protein | SAMN05421757_101406 | Not Available | Positive | 424554 - 424928 | 12405.7 |
| hypothetical protein | SAMN05421757_101407 | Not Available | Negative | 425025 - 425228 | 7731.29 |
| hypothetical protein | SAMN05421757_101408 | Not Available | Positive | 425425 - 425601 | 5967.69 |
| entericidin ecna/b family protein | SAMN05421757_101409 | Not Available | Negative | 425606 - 425740 | 4601.68 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
