Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| holliday junction dna helicase subunit ruva | SAMN05421757_11184 | Not Available | Negative | 4622740 - 4623402 | 22691.4 |
| holliday junction endonuclease ruvc | SAMN05421757_11185 | Not Available | Negative | 4623399 - 4623902 | 17155.1 |
| protein of unknown function | SAMN05421757_11186 | Not Available | Positive | 4624248 - 4624454 | 7836.2 |
| hypothetical protein | SAMN05421757_11187 | Not Available | Negative | 4624581 - 4624913 | 12098.0 |
| [lsu ribosomal protein l11p]-lysine n-methyltransferase | SAMN05421757_11188 | Not Available | Negative | 4625005 - 4625877 | 30183.1 |
| hypothetical protein | SAMN05421757_11189 | Not Available | Negative | 4625943 - 4626350 | 15157.8 |
| peptide-methionine (s)-s-oxide reductase | SAMN05421757_11190 | Not Available | Negative | 4626538 - 4627200 | 24047.3 |
| predicted arabinose efflux permease, mfs family | SAMN05421757_11191 | Not Available | Negative | 4627281 - 4628516 | 45447.6 |
| sulphur transport | SAMN05421757_11192 | Not Available | Positive | 4628727 - 4629791 | 36515.5 |
| replication restart dna helicase pria | SAMN05421757_11193 | Not Available | Negative | 4629903 - 4632101 | 79750.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
