Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna(ile)-lysidine synthase | SAMN05421757_11174 | Not Available | Negative | 4613419 - 4614657 | 44325.3 |
| tol-pal system protein ybgf | SAMN05421757_11175 | Not Available | Negative | 4614713 - 4615537 | 28786.8 |
| peptidoglycan-associated lipoprotein | SAMN05421757_11176 | Not Available | Negative | 4615548 - 4616072 | 17970.9 |
| tolb protein | SAMN05421757_11177 | Not Available | Negative | 4616229 - 4617560 | 47185.7 |
| cell division and transport-associated protein tola | SAMN05421757_11178 | Not Available | Negative | 4617665 - 4618888 | 41788.1 |
| cell division and transport-associated protein tolr | SAMN05421757_11179 | Not Available | Negative | 4618899 - 4619378 | 16721.3 |
| cell division and transport-associated protein tolq | SAMN05421757_11180 | Not Available | Negative | 4619382 - 4620077 | 25185.2 |
| acyl-coa thioester hydrolase | SAMN05421757_11181 | Not Available | Negative | 4620342 - 4620728 | 14751.9 |
| hypothetical protein | SAMN05421757_11182 | Not Available | Negative | 4620807 - 4621436 | 22961.7 |
| holliday junction dna helicase subunit ruvb | SAMN05421757_11183 | Not Available | Negative | 4621585 - 4622616 | 37467.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
