Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xanthine dehydrogenase, molybdenum binding subunit apoprotein | SAMN05421757_11154 | Not Available | Positive | 4588228 - 4590597 | 84394.1 |
| molybdenum cofactor sulfurylase | SAMN05421757_11155 | Not Available | Positive | 4590594 - 4591550 | 33122.0 |
| nucleoside abc transporter atp-binding protein | SAMN05421757_11156 | Not Available | Positive | 4591547 - 4593106 | 55529.0 |
| nucleoside abc transporter membrane protein | SAMN05421757_11157 | Not Available | Positive | 4593103 - 4594185 | 38256.0 |
| nucleoside abc transporter membrane protein | SAMN05421757_11158 | Not Available | Positive | 4594185 - 4595117 | 32218.5 |
| voltage-gated potassium channel | SAMN05421757_11159 | Not Available | Positive | 4595136 - 4595936 | 29972.1 |
| nucleoside-binding protein | SAMN05421757_11160 | Not Available | Positive | 4595939 - 4597012 | 38200.7 |
| hemolysin-type calcium-binding repeat-containing protein | SAMN05421757_11161 | Not Available | Positive | 4597178 - 4598053 | 31871.0 |
| hypothetical protein | SAMN05421757_11162 | Not Available | Positive | 4598156 - 4600102 | 70307.4 |
| cbs domain-containing protein | SAMN05421757_11163 | Not Available | Negative | 4600141 - 4600587 | 16656.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
