Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase, gt2 family | SAMN05421757_11124 | Not Available | Positive | 4556868 - 4557953 | 39573.3 |
| membrane protein involved in the export of o-antigen and teichoic acid | SAMN05421757_11125 | Not Available | Positive | 4557937 - 4559241 | 45863.8 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05421757_11126 | Not Available | Positive | 4559238 - 4560170 | 33352.4 |
| predicted phosphohydrolase or phosphomutase, alkp superfamily | SAMN05421757_11127 | Not Available | Positive | 4560199 - 4561767 | 58313.7 |
| dihydroflavonol-4-reductase | SAMN05421757_11128 | Not Available | Positive | 4561764 - 4562750 | 34793.6 |
| predicted phosphohydrolase or phosphomutase, alkp superfamily | SAMN05421757_11129 | Not Available | Positive | 4562747 - 4564312 | 57434.4 |
| predicted phosphohydrolase or phosphomutase, alkp superfamily | SAMN05421757_11130 | Not Available | Positive | 4564309 - 4565829 | 54245.7 |
| choline dehydrogenase | SAMN05421757_11131 | Not Available | Positive | 4565826 - 4567433 | 57212.0 |
| Trna-arg | Not Available | Not Available | Positive | 4567484 - 4567560 | Not Available |
| transcriptional regulator, tetr family | SAMN05421757_11133 | Not Available | Positive | 4567667 - 4568275 | 22092.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
