Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ureidoacrylate peracid hydrolase | SAMN05421757_110165 | Not Available | Positive | 4530511 - 4531206 | 25074.0 |
| aminoacrylate peracid reductase | SAMN05421757_110166 | Not Available | Positive | 4531230 - 4531616 | 13861.6 |
| nitt/taut family transport system permease protein | SAMN05421757_110167 | Not Available | Positive | 4531616 - 4532434 | 29710.2 |
| aminoacrylate hydrolase | SAMN05421757_110168 | Not Available | Positive | 4532436 - 4533236 | 28998.5 |
| nitt/taut family transport system atp-binding protein | SAMN05421757_110169 | Not Available | Positive | 4533233 - 4534021 | 28954.0 |
| dna-binding response regulator, narl/fixj family, contains rec and hth domains | SAMN05421757_110170 | Not Available | Positive | 4534294 - 4534965 | 24118.0 |
| hypothetical protein | SAMN05421757_110171 | Not Available | Negative | 4535013 - 4536950 | 67392.6 |
| hypothetical protein | SAMN05421757_1111 | Not Available | Positive | 4537841 - 4538218 | 13630.2 |
| hypothetical protein | SAMN05421757_1112 | Not Available | Positive | 4538488 - 4539264 | 29111.2 |
| Trna-leu | Not Available | Not Available | Positive | 4539437 - 4539522 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
