Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c7 | SAMN05421757_110125 | Not Available | Positive | 4485320 - 4486504 | 42914.1 |
| octaheme c-type cytochrome, tetrathionate reductase family | SAMN05421757_110126 | Not Available | Positive | 4486597 - 4488339 | 61159.2 |
| thiosulfate reductase cytochrome b subunit | SAMN05421757_110127 | Not Available | Positive | 4488332 - 4488964 | 24076.6 |
| hypothetical protein | SAMN05421757_110128 | Not Available | Positive | 4489127 - 4489591 | 17474.9 |
| hypothetical protein | SAMN05421757_110129 | Not Available | Positive | 4489819 - 4490934 | 40566.8 |
| hypothetical protein | SAMN05421757_110130 | Not Available | Positive | 4491064 - 4491522 | 16341.5 |
| hypothetical protein | SAMN05421757_110131 | Not Available | Positive | 4491536 - 4492033 | 18100.6 |
| trap transporter, dctm subunit | SAMN05421757_110132 | Not Available | Negative | 4492192 - 4493517 | 46870.9 |
| trap-type c4-dicarboxylate transport system, small permease component | SAMN05421757_110133 | Not Available | Negative | 4493517 - 4494116 | 22189.3 |
| trap-type mannitol/chloroaromatic compound transport system, substrate-binding protein | SAMN05421757_110134 | Not Available | Negative | 4494189 - 4495202 | 36497.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
