Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| quinol monooxygenase ygin | SAMN05421757_11095 | Not Available | Negative | 4444840 - 4445130 | 10695.5 |
| putative tricarboxylic transport membrane protein | SAMN05421757_11096 | Not Available | Negative | 4445130 - 4446641 | 52563.0 |
| hypothetical protein | SAMN05421757_11097 | Not Available | Negative | 4446643 - 4447386 | 27658.0 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05421757_11098 | Not Available | Negative | 4447448 - 4448452 | 34701.1 |
| 3-isopropylmalate dehydrogenase | SAMN05421757_11099 | Not Available | Positive | 4448573 - 4449676 | 39525.1 |
| predicted dehydrogenase | SAMN05421757_110100 | Not Available | Positive | 4449673 - 4450704 | 37951.1 |
| transcriptional regulator, gntr family | SAMN05421757_110101 | Not Available | Positive | 4450701 - 4451378 | 25069.0 |
| hypothetical protein | SAMN05421757_110102 | Not Available | Negative | 4451246 - 4452040 | 28153.0 |
| transcriptional regulator, marr family | SAMN05421757_110103 | Not Available | Negative | 4452267 - 4453490 | 44215.0 |
| fructose transport system substrate-binding protein | SAMN05421757_110104 | Not Available | Positive | 4453676 - 4454686 | 34740.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
