Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421757_11075 | Not Available | Negative | 4425407 - 4426507 | 38414.8 |
| tcta family transporter | SAMN05421757_11076 | Not Available | Negative | 4426504 - 4428534 | 70967.1 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05421757_11077 | Not Available | Negative | 4428612 - 4429700 | 38457.3 |
| two-component system, ompr family, response regulator | SAMN05421757_11078 | Not Available | Positive | 4429838 - 4430506 | 24583.4 |
| two-component system, ompr family, sensor histidine kinase tcte | SAMN05421757_11079 | Not Available | Positive | 4430506 - 4431882 | 49811.5 |
| sulfoxide reductase heme-binding subunit yedz | SAMN05421757_11080 | Not Available | Negative | 4431960 - 4432559 | 22638.0 |
| nad(p)h dehydrogenase (quinone) | SAMN05421757_11081 | Not Available | Negative | 4432678 - 4433517 | 29670.1 |
| hypothetical protein | SAMN05421757_11082 | Not Available | Negative | 4433544 - 4433645 | 3480.06 |
| hypothetical protein | SAMN05421757_11083 | Not Available | Negative | 4433810 - 4434220 | 14837.3 |
| predicted ester cyclase | SAMN05421757_11084 | Not Available | Negative | 4434431 - 4434916 | 17005.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
