Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh-quinone oxidoreductase subunit c | SAMN05421757_11025 | Not Available | Positive | 4368328 - 4368858 | 20545.6 |
| nadh-quinone oxidoreductase subunit d | SAMN05421757_11026 | Not Available | Positive | 4368860 - 4370038 | 43928.1 |
| membrane bound protein complex subunit mbxn | SAMN05421757_11027 | Not Available | Positive | 4370042 - 4371838 | 65553.2 |
| rubrerythrin | SAMN05421757_11028 | Not Available | Positive | 4371835 - 4372329 | 18374.6 |
| transposase dde domain-containing protein | SAMN05421757_11029 | Not Available | Positive | 4372484 - 4372723 | 8827.69 |
| acyl-coa reductase | SAMN05421757_11030 | Not Available | Negative | 4373537 - 4375717 | 75469.8 |
| amino acid/amide abc transporter atp-binding protein 1, haat family | SAMN05421757_11031 | Not Available | Negative | 4375710 - 4376438 | 25372.7 |
| amino acid/amide abc transporter membrane protein 2, haat family | SAMN05421757_11032 | Not Available | Negative | 4376435 - 4377343 | 32042.1 |
| amino acid/amide abc transporter membrane protein 1, haat family | SAMN05421757_11033 | Not Available | Negative | 4377345 - 4378232 | 30489.4 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN05421757_11034 | Not Available | Negative | 4378276 - 4379493 | 42897.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
