Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enoyl-coa hydratase/carnithine racemase | SAMN05421757_101370 | Not Available | Positive | 388992 - 389795 | 28311.3 |
| protein of unknown function | SAMN05421757_101371 | Not Available | Negative | 389907 - 390146 | 8818.22 |
| hypothetical protein | SAMN05421757_101372 | Not Available | Negative | 390259 - 390861 | 21598.6 |
| moxr-like atpase | SAMN05421757_101373 | Not Available | Positive | 390921 - 391928 | 36338.1 |
| protein of unknown function duf58 | SAMN05421757_101374 | Not Available | Positive | 391925 - 392830 | 32918.0 |
| n-terminal double-transmembrane domain-containing protein | SAMN05421757_101375 | Not Available | Positive | 392830 - 395598 | 97939.5 |
| hypothetical protein | SAMN05421757_101376 | Not Available | Positive | 395595 - 397682 | 74869.8 |
| abc-2 type transport system atp-binding protein | SAMN05421757_101377 | Not Available | Positive | 397830 - 398771 | 34802.1 |
| abc-2 type transport system permease protein | SAMN05421757_101378 | Not Available | Positive | 398768 - 399529 | 27841.9 |
| gcra cell cycle regulator | SAMN05421757_101379 | Not Available | Negative | 399638 - 400261 | 22549.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
