Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp:cob(i)alamin adenosyltransferase | SAMN05421757_109119 | Not Available | Negative | 4258023 - 4258445 | 14180.1 |
| n-ethylmaleimide reductase | SAMN05421757_109120 | Not Available | Positive | 4258753 - 4259859 | 39721.3 |
| phosphohistidine phosphatase | SAMN05421757_109121 | Not Available | Negative | 4259886 - 4260833 | 34614.6 |
| cofd-related protein, gak system | SAMN05421757_109122 | Not Available | Negative | 4260896 - 4262083 | 42916.7 |
| adp-ribose pyrophosphatase yjhb, nudix family | SAMN05421757_109123 | Not Available | Positive | 4262157 - 4262606 | 16282.6 |
| phosphotransferase enzyme family protein | SAMN05421757_109124 | Not Available | Positive | 4262599 - 4264236 | 62011.5 |
| ribosomal protein s6--l-glutamate ligase | SAMN05421757_109125 | Not Available | Positive | 4264229 - 4265113 | 31637.3 |
| hprk-related kinase b | SAMN05421757_109126 | Not Available | Positive | 4265110 - 4266195 | 39477.1 |
| 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase | SAMN05421757_109127 | Not Available | Positive | 4266199 - 4266903 | 25647.2 |
| hypothetical protein | SAMN05421757_109128 | Not Available | Positive | 4266922 - 4268277 | 49366.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
