Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane transport energization protein exbb | SAMN05421757_10999 | Not Available | Negative | 4238764 - 4239447 | 24519.0 |
| hypothetical protein | SAMN05421757_109100 | Not Available | Negative | 4239444 - 4239836 | 13714.4 |
| hypothetical protein | SAMN05421757_109101 | Not Available | Positive | 4240340 - 4241836 | 55245.6 |
| putative flippase gtra (transmembrane translocase of bactoprenol-linked glucose) | SAMN05421757_109102 | Not Available | Positive | 4241833 - 4242240 | 15777.5 |
| aspartyl-trna(asn)/glutamyl-trna(gln) amidotransferase subunit a | SAMN05421757_109103 | Not Available | Negative | 4242324 - 4243730 | 50279.8 |
| kynurenine formamidase | SAMN05421757_109104 | Not Available | Negative | 4243857 - 4244561 | 26052.2 |
| trap transporter, dctm subunit | SAMN05421757_109105 | Not Available | Negative | 4244632 - 4245975 | 46858.9 |
| trap-type c4-dicarboxylate transport system, small permease component | SAMN05421757_109106 | Not Available | Negative | 4246111 - 4246641 | 18775.8 |
| trap-type c4-dicarboxylate transport system, substrate-binding protein | SAMN05421757_109107 | Not Available | Negative | 4246692 - 4247759 | 38982.4 |
| dna-binding transcriptional regulator, lysr family | SAMN05421757_109108 | Not Available | Positive | 4247891 - 4248814 | 33557.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
