Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac-type dna-binding protein | SAMN05421757_10989 | Not Available | Negative | 4229828 - 4230790 | 34702.1 |
| hemoglobin/transferrin/lactoferrin receptor protein | SAMN05421757_10990 | Not Available | Positive | 4230966 - 4232933 | 70275.4 |
| hypothetical protein | SAMN05421757_10991 | Not Available | Negative | 4232997 - 4233293 | 11140.1 |
| iron complex transport system substrate-binding protein | SAMN05421757_10992 | Not Available | Positive | 4233423 - 4234331 | 30840.6 |
| iron complex transport system permease protein | SAMN05421757_10993 | Not Available | Positive | 4234383 - 4235336 | 32848.7 |
| iron complex transport system permease protein | SAMN05421757_10994 | Not Available | Positive | 4235329 - 4236273 | 33328.8 |
| iron complex transport system atp-binding protein | SAMN05421757_10995 | Not Available | Positive | 4236270 - 4237037 | 27737.7 |
| outer membrane transport energization protein tonb | SAMN05421757_10996 | Not Available | Negative | 4237051 - 4238004 | 32010.5 |
| biopolymer transport protein exbd | SAMN05421757_10997 | Not Available | Negative | 4238001 - 4238390 | 14040.3 |
| outer membrane transport energization protein exbd | SAMN05421757_10998 | Not Available | Negative | 4238394 - 4238732 | 11893.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
