Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein | SAMN05421757_10959 | Not Available | Positive | 4197177 - 4197812 | 22946.7 |
| kup system potassium uptake protein | SAMN05421757_10960 | Not Available | Positive | 4197809 - 4199725 | 68364.3 |
| cell division protease ftsh | SAMN05421757_10961 | Not Available | Negative | 4199826 - 4201778 | 70272.9 |
| cytochrome c oxidase, cbb3-type, subunit iii | SAMN05421757_10962 | Not Available | Negative | 4202114 - 4202611 | 17172.5 |
| fad/fmn-containing dehydrogenase | SAMN05421757_10963 | Not Available | Negative | 4202660 - 4204018 | 47242.8 |
| pyridoxamine 5'-phosphate oxidase | SAMN05421757_10964 | Not Available | Negative | 4204222 - 4205574 | 48815.9 |
| hypothetical protein | SAMN05421757_10965 | Not Available | Negative | 4205571 - 4206062 | 16768.1 |
| transcriptional regulator, arac family | SAMN05421757_10966 | Not Available | Positive | 4206425 - 4207432 | 36720.5 |
| dna-binding transcriptional regulator, lysr family | SAMN05421757_10967 | Not Available | Positive | 4207493 - 4208389 | 32419.2 |
| nad(p)h dehydrogenase (quinone) | SAMN05421757_10968 | Not Available | Positive | 4208485 - 4209108 | 21518.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
