Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hupe / urej protein | SAMN05421757_10949 | Not Available | Negative | 4179210 - 4180403 | 44675.6 |
| udp:flavonoid glycosyltransferase yjic, ydhe family | SAMN05421757_10950 | Not Available | Negative | 4180500 - 4181837 | 48135.0 |
| l-prolyl-[peptidyl carrier protein] dehydrogenase | SAMN05421757_10951 | Not Available | Negative | 4181895 - 4183055 | 41294.1 |
| amino acid adenylation domain-containing protein | SAMN05421757_10952 | Not Available | Negative | 4183128 - 4187861 | 169569.0 |
| amino acid adenylation domain-containing protein | SAMN05421757_10953 | Not Available | Negative | 4187858 - 4192036 | 151417.0 |
| acyl carrier protein | SAMN05421757_10954 | Not Available | Negative | 4192033 - 4192266 | 8380.27 |
| amino acid adenylation domain-containing protein | SAMN05421757_10955 | Not Available | Negative | 4192259 - 4193872 | 57732.1 |
| phosphopantetheine--protein transferase domain-containing protein | SAMN05421757_10956 | Not Available | Positive | 4194215 - 4195048 | 29398.9 |
| hypothetical protein | SAMN05421757_10957 | Not Available | Negative | 4195219 - 4195617 | 13403.7 |
| tellurite resistance protein terc | SAMN05421757_10958 | Not Available | Positive | 4196158 - 4197180 | 37687.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
