Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| monosaccharide abc transporter membrane protein, cut2 family | SAMN05421757_10939 | Not Available | Positive | 4169141 - 4170145 | 35016.1 |
| phosphotriesterase-related protein | SAMN05421757_10940 | Not Available | Positive | 4170142 - 4171206 | 38930.8 |
| uncharacterized membrane protein | SAMN05421757_10941 | Not Available | Positive | 4171223 - 4171987 | 28034.5 |
| ribokinase | SAMN05421757_10942 | Not Available | Negative | 4172009 - 4172887 | 29793.7 |
| hypothetical protein | SAMN05421757_10943 | Not Available | Positive | 4172920 - 4173762 | 30035.9 |
| thiaminase (transcriptional activator tena) | SAMN05421757_10944 | Not Available | Positive | 4173755 - 4174420 | 24467.9 |
| acetylornithine deacetylase | SAMN05421757_10945 | Not Available | Negative | 4174390 - 4175484 | 38380.6 |
| transcriptional regulator, lysr family | SAMN05421757_10946 | Not Available | Negative | 4175620 - 4176531 | 32753.8 |
| hypothetical protein | SAMN05421757_10947 | Not Available | Positive | 4176631 - 4177596 | 33353.0 |
| iron-sulfur cluster-binding domain-containing protein | SAMN05421757_10948 | Not Available | Negative | 4177658 - 4179076 | 52221.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
