Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rnase ph | SAMN05421757_108171 | Not Available | Negative | 4042139 - 4042852 | 25127.1 |
| heat-inducible transcription repressor hrca | SAMN05421757_108172 | Not Available | Positive | 4042985 - 4044049 | 39113.7 |
| molecular chaperone grpe | SAMN05421757_108173 | Not Available | Positive | 4044059 - 4044637 | 21459.2 |
| dna mismatch repair protein muts | SAMN05421757_108174 | Not Available | Negative | 4044701 - 4047343 | 94561.9 |
| malate dehydrogenase (oxaloacetate-decarboxylating)(nadp+) | SAMN05421757_108175 | Not Available | Positive | 4047514 - 4049769 | 80999.7 |
| ribokinase | SAMN05421757_108176 | Not Available | Positive | 4049774 - 4050667 | 30693.8 |
| peptide-methionine (s)-s-oxide reductase | SAMN05421757_108177 | Not Available | Negative | 4050787 - 4051494 | 25355.8 |
| hypothetical protein | SAMN05421757_108178 | Not Available | Positive | 4051688 - 4052383 | 25784.9 |
| scp-2 sterol transfer family protein | SAMN05421757_108179 | Not Available | Negative | 4052393 - 4052680 | 10027.4 |
| argininosuccinate synthase | SAMN05421757_108180 | Not Available | Negative | 4052795 - 4054018 | 45900.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
