Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fmn-dependent nadh-azoreductase | SAMN05421757_101340 | Not Available | Negative | 362910 - 363500 | 20675.8 |
| ca2+-binding protein, ef-hand superfamily | SAMN05421757_101341 | Not Available | Negative | 363686 - 364546 | 30280.2 |
| transcriptional regulator, lysr family | SAMN05421757_101342 | Not Available | Positive | 364762 - 365646 | 33287.0 |
| eama-like transporter family protein | SAMN05421757_101343 | Not Available | Positive | 365691 - 366539 | 29935.4 |
| transcriptional regulator, arsr family | SAMN05421757_101344 | Not Available | Negative | 366549 - 366914 | 13659.4 |
| hypothetical protein | SAMN05421757_101345 | Not Available | Negative | 366996 - 367193 | 7279.68 |
| hypothetical protein | SAMN05421757_101346 | Not Available | Negative | 367491 - 367682 | 6987.26 |
| permease of the drug/metabolite transporter (dmt) superfamily | SAMN05421757_101347 | Not Available | Positive | 367930 - 368820 | 30912.2 |
| atp synthase protein i | SAMN05421757_101348 | Not Available | Positive | 369057 - 369386 | 11714.4 |
| atp synthase f0 subcomplex a subunit | SAMN05421757_101349 | Not Available | Positive | 369391 - 370140 | 27075.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
