Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenosylhomocysteinase | SAMN05421757_10890 | Not Available | Negative | 3965513 - 3966907 | 51137.5 |
| hypothetical protein | SAMN05421757_10891 | Not Available | Positive | 3967021 - 3967614 | 21750.5 |
| hypothetical protein | SAMN05421757_10892 | Not Available | Negative | 3967639 - 3967983 | 11972.2 |
| hypothetical protein | SAMN05421757_10893 | Not Available | Negative | 3968173 - 3968574 | 13248.9 |
| two-component system, response regulator rega | SAMN05421757_10894 | Not Available | Negative | 3968580 - 3969134 | 20340.3 |
| protein sco1/2 | SAMN05421757_10895 | Not Available | Negative | 3969240 - 3969869 | 23087.2 |
| two-component system, sensor histidine kinase regb | SAMN05421757_10896 | Not Available | Positive | 3969963 - 3971363 | 50926.9 |
| pas domain-containing protein | SAMN05421757_10897 | Not Available | Positive | 3971445 - 3973037 | 59085.2 |
| trna threonylcarbamoyladenosine biosynthesis protein tsae | SAMN05421757_10898 | Not Available | Positive | 3973092 - 3973607 | 17788.1 |
| hypothetical protein | SAMN05421757_10899 | Not Available | Positive | 3973604 - 3974626 | 36590.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
