Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421757_10818 | Not Available | Negative | 3885979 - 3886185 | 7572.11 |
| predicted p-loop atpase and inactivated derivatives | SAMN05421757_10819 | Not Available | Negative | 3886519 - 3888537 | 75371.3 |
| phosphoserine aminotransferase apoenzyme | SAMN05421757_10821 | Not Available | Positive | 3888911 - 3890065 | 41218.2 |
| d-3-phosphoglycerate dehydrogenase | SAMN05421757_10822 | Not Available | Positive | 3890140 - 3891735 | 56570.6 |
| serine/threonine protein phosphatase 1 | SAMN05421757_10823 | Not Available | Positive | 3891812 - 3892552 | 26955.1 |
| hypothetical protein | SAMN05421757_10824 | Not Available | Positive | 3892959 - 3893267 | 11038.3 |
| hpr(ser) kinase/phosphatase | SAMN05421757_10825 | Not Available | Positive | 3893391 - 3894527 | 40395.2 |
| uncharacterised nucleotidyltransferase | SAMN05421757_10826 | Not Available | Positive | 3894500 - 3895561 | 39501.6 |
| l-threonine 3-dehydrogenase | SAMN05421757_10827 | Not Available | Negative | 3895619 - 3896656 | 37555.6 |
| methyltransferase domain-containing protein | SAMN05421757_10828 | Not Available | Negative | 3896653 - 3897261 | 21093.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
