Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421757_107235 | Not Available | Positive | 3813779 - 3814126 | 13199.5 |
| predicted n-acetyltransferase yhbs | SAMN05421757_107236 | Not Available | Negative | 3814105 - 3814638 | 19210.2 |
| nadh-fmn oxidoreductase rutf, flavin reductase (dim6/ntab) family | SAMN05421757_107237 | Not Available | Positive | 3814696 - 3815301 | 22252.3 |
| hypothetical protein | SAMN05421757_107238 | Not Available | Negative | 3815312 - 3815719 | 14784.5 |
| hypothetical protein | SAMN05421757_107239 | Not Available | Negative | 3815897 - 3816043 | 5031.05 |
| sulfate permease, sulp family | SAMN05421757_107240 | Not Available | Negative | 3816137 - 3817762 | 56854.6 |
| hypothetical protein | SAMN05421757_107241 | Not Available | Negative | 3817982 - 3818584 | 21314.8 |
| methylthioadenosine phosphorylase | SAMN05421757_107242 | Not Available | Positive | 3818699 - 3819568 | 31095.1 |
| hypothetical protein | SAMN05421757_107243 | Not Available | Negative | 3819680 - 3820492 | 28771.8 |
| 5-formyltetrahydrofolate cyclo-ligase | SAMN05421757_107244 | Not Available | Negative | 3820603 - 3821175 | 20409.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
