Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421757_107225 | Not Available | Negative | 3802685 - 3803077 | 14881.3 |
| hypothetical protein | SAMN05421757_107226 | Not Available | Negative | 3803118 - 3803513 | 13934.5 |
| hypothetical protein | SAMN05421757_107227 | Not Available | Negative | 3803510 - 3803857 | 12815.5 |
| propionyl-coa carboxylase carboxyltransferase subunit | SAMN05421757_107228 | Not Available | Negative | 3803972 - 3805504 | 56036.8 |
| mfs transporter, dha1 family, bicyclomycin/chloramphenicol resistance protein | SAMN05421757_107229 | Not Available | Positive | 3805696 - 3806916 | 43162.7 |
| hypothetical protein | SAMN05421757_107230 | Not Available | Positive | 3806966 - 3808351 | 50799.4 |
| hypothetical protein | SAMN05421757_107231 | Not Available | Negative | 3808375 - 3808614 | 9222.02 |
| transporter, cpa2 family | SAMN05421757_107232 | Not Available | Positive | 3808764 - 3809942 | 40006.4 |
| aspartate kinase | SAMN05421757_107233 | Not Available | Positive | 3810039 - 3811277 | 44277.0 |
| phosphotransferase system, enzyme i, ptsp | SAMN05421757_107234 | Not Available | Positive | 3811311 - 3813551 | 82606.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
