Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein yaan involved in tellurite resistance | SAMN05421757_101319 | Not Available | Negative | 347560 - 348759 | 43935.1 |
| 5-bromo-4-chloroindolyl phosphate hydrolysis protein | SAMN05421757_101320 | Not Available | Negative | 348785 - 349678 | 31930.4 |
| hypothetical protein | SAMN05421757_101321 | Not Available | Negative | 349678 - 349887 | 6913.13 |
| endoglucanase | SAMN05421757_101322 | Not Available | Negative | 350087 - 351130 | 37539.2 |
| lsu ribosomal protein l31p | SAMN05421757_101323 | Not Available | Negative | 351358 - 351579 | 8099.66 |
| lsu ribosomal protein l19p | SAMN05421757_101324 | Not Available | Negative | 351591 - 351962 | 13740.4 |
| flp pilus assembly protein tadg | SAMN05421757_101325 | Not Available | Positive | 352440 - 352850 | 15017.1 |
| flp pilus assembly protein tadg | SAMN05421757_101326 | Not Available | Positive | 352887 - 354377 | 51325.7 |
| trna (guanine37-n(1)-) methyltransferase | SAMN05421757_101327 | Not Available | Negative | 354408 - 355217 | 29507.1 |
| hypothetical protein | SAMN05421757_101328 | Not Available | Negative | 355210 - 356142 | 33265.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
