Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prolyl-trna synthetase | SAMN05421757_107205 | Not Available | Negative | 3779280 - 3780617 | 50692.3 |
| predicted purr-regulated permease perm | SAMN05421757_107206 | Not Available | Positive | 3780799 - 3781887 | 38883.6 |
| hypothetical protein | SAMN05421757_107207 | Not Available | Positive | 3781887 - 3782561 | 24470.5 |
| polyphosphate kinase | SAMN05421757_107208 | Not Available | Positive | 3782619 - 3784793 | 80950.1 |
| ppx/gppa phosphatase | SAMN05421757_107209 | Not Available | Positive | 3784846 - 3786408 | 57114.1 |
| hypothetical protein | SAMN05421757_107210 | Not Available | Negative | 3786436 - 3786810 | 13638.3 |
| endonuclease/exonuclease/phosphatase family protein | SAMN05421757_107211 | Not Available | Negative | 3786818 - 3787879 | 39553.8 |
| pyruvate ferredoxin oxidoreductase, gamma subunit | SAMN05421757_107212 | Not Available | Positive | 3788098 - 3788715 | 21754.2 |
| pyruvate ferredoxin oxidoreductase alpha subunit | SAMN05421757_107213 | Not Available | Positive | 3788708 - 3789877 | 41742.2 |
| pyruvate ferredoxin oxidoreductase, beta subunit | SAMN05421757_107214 | Not Available | Positive | 3789877 - 3790950 | 39185.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
