Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421757_107125 | Not Available | Negative | 3692657 - 3692989 | 11436.1 |
| dna-binding regulatory protein, yebc/pmpr family | SAMN05421757_107126 | Not Available | Negative | 3693558 - 3694298 | 26713.0 |
| di- and tricarboxylate transporter | SAMN05421757_107127 | Not Available | Negative | 3694406 - 3696184 | 63821.9 |
| l-ascorbate metabolism protein ulag, beta-lactamase superfamily | SAMN05421757_107128 | Not Available | Positive | 3696386 - 3697294 | 33514.2 |
| fad/fmn-containing dehydrogenase | SAMN05421757_107129 | Not Available | Positive | 3697370 - 3698785 | 50010.3 |
| adenine phosphoribosyltransferase | SAMN05421757_107130 | Not Available | Negative | 3698896 - 3699435 | 19156.3 |
| ribosomal-protein-alanine n-acetyltransferase | SAMN05421757_107131 | Not Available | Negative | 3699668 - 3700252 | 22403.1 |
| predicted zn-dependent peptidase | SAMN05421757_107132 | Not Available | Negative | 3700252 - 3701514 | 45944.6 |
| l-threonine synthase | SAMN05421757_107133 | Not Available | Negative | 3701511 - 3702899 | 50013.6 |
| surfeit locus 1 family protein | SAMN05421757_107134 | Not Available | Negative | 3703002 - 3703697 | 25670.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
